GitHub - nothing128/sc-benchmarking

Name		Name	Last commit message	Last commit date
Latest commit History 414 Commits
__pycache__		__pycache__
old		old
TODO.txt		TODO.txt
accuracy.R		accuracy.R
benchmark_variation.R		benchmark_variation.R
combined_vis.R		combined_vis.R
embed_experiment.py		embed_experiment.py
embed_mre.py		embed_mre.py
gil_comparison.R		gil_comparison.R
monitor_mem.sh		monitor_mem.sh
pacmap_experiment.py		pacmap_experiment.py
plot_pictures.R		plot_pictures.R
prep_data.py		prep_data.py
run_sc_all.py		run_sc_all.py
runtime against size.R		runtime against size.R
segfault_mrv.py		segfault_mrv.py
test_basic_brisc.py		test_basic_brisc.py
test_basic_sc_scanpy_pipeline_1.py		test_basic_sc_scanpy_pipeline_1.py
test_basic_sc_scanpy_pipeline_2.py		test_basic_sc_scanpy_pipeline_2.py
test_basic_sc_scanpy_pipeline_3.py		test_basic_sc_scanpy_pipeline_3.py
test_basic_scanpy.py		test_basic_scanpy.py
test_basic_seurat.R		test_basic_seurat.R
test_de_brisc.py		test_de_brisc.py
test_de_scanpy.py		test_de_scanpy.py
test_de_seurat.R		test_de_seurat.R
test_read_obs.R		test_read_obs.R
test_transfer_brisc.py		test_transfer_brisc.py
test_transfer_scanpy.py		test_transfer_scanpy.py
test_transfer_seurat.R		test_transfer_seurat.R
test_transfer_seurat_bpcells.R		test_transfer_seurat_bpcells.R
utils_local.R		utils_local.R
utils_local.py		utils_local.py