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1. rapids_singlecell rapids_singlecell Public

   Forked from scverse/rapids_singlecell

   Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.

   Python

2. cugraph cugraph Public

   Forked from rapidsai/cugraph

   cuGraph - RAPIDS Graph Analytics Library

   Cuda

3. infercnvpy infercnvpy Public

   Forked from icbi-lab/infercnvpy

   Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

   Python

4. countland countland Public

   Forked from shchurch/countland

   tools in python and R for analyzing biological count data, especially from single cell RNAseq

   Jupyter Notebook

5. CellBender CellBender Public

   Forked from broadinstitute/CellBender

   CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

   Python

6. scUTRquant scUTRquant Public

   Forked from Mayrlab/scUTRquant

   Bioinformatics pipeline for single-cell 3' UTR isoform quantification

   Python