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capuccino26/README.md

Pedro Carvalho

Complete Resume 🚀

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Summary

Hello World!

  • PhD Student in Genetics and Plant Breeding - PPG-GMP, ESALQ/USP
  • Researcher at LAMP/CENA/ESALQ-USP - Focus on plant breeding and genetics
  • Project Development - Transcriptome and Network analysis associated with water deficit tolerance in sugarcane
  • Technologies - Bioinformatics, data science, backend development, web development

Trophy

Development

MacroTrends Scraping Repo Stats Oceans14 Scraping Repo Stats RNAseq Repo Stats PTPP Repo Stats

Experience

  • Cytogenetics: Fluorescent hybridization techniques
  • Molecular Genetics: Sequencing and genotyping techniques
  • Bioinformatics: RNA-seq analysis, genome & transcriptome assembly, systems biology
  • R Packages: DESeq2, edgeR, tidyverse, ggplot2, clusterProfiler, and others
  • Python Packages: pandas, numpy, matplotlib, selenium, BeautifulSoup
  • Software: Muscle, ClustalW, STAR, Salmon, Samtools, and others
  • Environments: Conda, Nextflow, Snakemake, Docker

Education

  • PhD in Agronomy (Genetics and Plant Breeding) (2023 - present)

    • LAMP/CENA/ESALQ-USP, São Paulo, Brazil
    • Title: Integration of sugarcane transcriptome with metabolic pathways and protein interactions
    • Grants: FAPESP, CAPES
  • Master of Science (Medical Genetics) (2018 - 2020)

    • LCH/DM/FCM-UNICAMP, São Paulo, Brazil
    • Title: Investigation of susceptibility factors to 22q11.2 deletion
    • Grants: FAPESP, CAPES, FAEPEX
  • Bachelor of Science in Biological Sciences (2013 - 2017)

    • LCP/DGE/CCBS-UFSCar, São Paulo, Brazil
    • Title: Comparative cytogenetics in the family Hepsetidae
    • Grant: FAPESP

Complementary Qualifications

  • English proficiency (C1) - TOEFL-ITP Level 1 (2023)
  • Reviewer - Human Gene journal (2023 - present)
    • ISSN: 2773-0441
  • Reviewer - Gene journal (2023 - present)
    • ISSN: 1879-0038 (Online)
  • Course in AgriTechs Business Fundamentals (2023)
  • Research Internship Abroad (2017) - Molecular Cytogenetics Laboratory, Universitätsklinikum Jena, Germany

Popular repositories Loading

  1. MacroTrends-Scraping MacroTrends-Scraping Public

    Web scraping and managing data from MacroTrends

    Python 24 11

  2. Oceans14-Scraping Oceans14-Scraping Public

    Raspagem de dados do Oceans14

    Jupyter Notebook 5

  3. BVMF-Scraping BVMF-Scraping Public

    Raspagem de dados do site da BVMF (Bovespa)

    Jupyter Notebook 1

  4. Tickers-Database Tickers-Database Public

    Database of american and brazilian stocks tickers

  5. RNAseq RNAseq Public

    Workflow for complete RNAseq analysis from .gz raw data.

    R

  6. StudyGroup StudyGroup Public

    Forked from BCCHR-trainee-omics-group/StudyGroup

    This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.

    HTML