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Flashing through chemical space, one scaffold at a time
Flashing through chemical space, one scaffold at a time

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anfelvas/README.md

👋 Hi, I’m @anfelvas (Andrés Felipe Vásquez)
🧪🌱 Computational biochemist | Natural product innovation 🌎 Based at Computational Chemistry Group – IPB Halle (Germany)

👀 I’m currently interested in:

  • AI-powered cheminformatics & explainable models
  • Natural products and chemical space expansion
  • Biodiversity-linked drug discovery and science diplomacy
  • AI/ML for retrosynthesis and pharmacophore modeling
  • Metabolomics and biosynthetic gene cluster mining for NP discovery 🔬🧬

📖🧬 I’m currently working on:

  • Simulation of carbohydrate-based microgels for agricultural applications, with focus on force field merging strategies (namely GLYCAM06j-1 + GAFF2) for large-scale AA-MD simulations
  • Fragment-based drug discovery (FBLD) approaches for drug design and discovery
  • Chemodiversity and chemical space modeling
  • A One Health knowledge graph connecting plants, natural products, and diseases
  • Knowledge graph–driven drug discovery 🧠🔗
  • Linking chemodiversity and biodiversity for biotech innovation
  • Science-policy interface for biodiversity and bioeconomy

🤝 I’m open to collaborations in:

  • Bioprospecting from plants, fungi, bacteria, and marine organisms 🌿🧫🌊
  • Natural product–inspired compound design and optimization 💊🧪
  • Structure-, ligand-, and complex-based virtual screening
  • Omics-guided drug discovery & biodiversity informatics
  • Ethnopharmacology, chemical ecology, biogeography, and traditional knowledge integration
  • Post-extraction recovery and habitat restoration (reforesting ecology)
  • Development of novel government-advised strategies and policy briefs on bioprospecting, medicine, startups, and STEM education

📫 Reach me at:

🔍Learn more about my work:

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