After installing the requirements (see below), simply run:
pip install fragmap
After installing, the fragmap application can be invoked with simply:
fragmap
See the help screen for command line options:
fragmap --help
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Git
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Python 3.6 or later
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Uninstall any existing versions of fragmap
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Clone this repo
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Run
pip install -r requirements.txtto install all requirements -
Run
pip install -r requirements-dev.txtto be able to run the test suite -
Run
python setup.py develop -
Run
python tests/update_tests.py. This also needs to be run if you make changes to any repo undertests/diffs/ -
Run
pytestto actually run the tests -
(Optional) Define the environment variable
FRAGMAP_DEBUGto get access to the--logargument.
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Clone this repo
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Source
bash_completion.shin the cloned directory