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Pull requests: ComparativeGenomicsToolkit/cactus

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Pull requests list

use -P instead of -w interface for specifying refpaths for snarls
#1872 opened Jan 5, 2026 by glennhickey Loading…
Update BCFtools to use stable sort
#1813 opened Nov 3, 2025 by ASLeonard Loading…
1
add -a to bcftools concat
#1809 opened Oct 30, 2025 by glennhickey Loading…
1
1
add taffy viz toil script (cactus-mafviz)
#1571 opened Dec 20, 2024 by glennhickey Loading…
try to orient bar jobs on reference to left-align downstream
#1248 opened Dec 12, 2023 by glennhickey Loading…
rGFA support (experimental)
#1186 opened Oct 3, 2023 by glennhickey Loading…
WIP: Pangenome Outgroups
#1043 opened Jun 8, 2023 by glennhickey Loading…
ProTip! What’s not been updated in a month: updated:<2025-12-09.