Commits

Branch selector

 master

User selector

All users

All time

Commit History

Commits on Oct 27, 2025

• Bump version: 0.29.5 → 0.30.0

  Yenaled

  committed
  0391b45

  Copy full SHA for 0391b45

• Merge pull request #302 from BenjaminDEMAILLE/master

  Show description for 2e70b73
  Yenaled

  authored
  2e70b73

  Copy full SHA for 2e70b73

• Delete IMPLEMENTATION_SUMMARY.md

  Yenaled

  authored
  eabdca1

  Copy full SHA for eabdca1

Commits on Oct 23, 2025

• Add --cellranger, --gzip, --delete-bus, and --genomebam/--cram support

  Show description for cce7a4d
  BenjaminDEMAILLE

  committed
  cce7a4d

  Copy full SHA for cce7a4d

Commits on May 27, 2025

• Bump version: 0.29.4 → 0.29.5

  Show description for dadae35
  Yenaled

  committed
  dadae35

  Copy full SHA for dadae35

Commits on May 11, 2025

• Bump version: 0.29.3 → 0.29.4

  Yenaled

  committed
  a76377b

  Copy full SHA for a76377b

Commits on Apr 25, 2025

• Bump version: 0.29.2 → 0.29.3

  Yenaled

  committed
  a45822f

  Copy full SHA for a45822f

• Merge pull request #291 from pachterlab/devel

  Show description for b76a931
  Yenaled

  authored
  b76a931

  Copy full SHA for b76a931

• temporary adjustment to 10xv4

  Yenaled

  committed
  a0df33a

  Copy full SHA for a0df33a

• attempt to improve coverage

  Yenaled

  committed
  5d4eb5c

  Copy full SHA for 5d4eb5c

• fix test

  Yenaled

  committed
  eb5f562

  Copy full SHA for eb5f562

• style

  Yenaled

  committed
  31080ec

  Copy full SHA for 31080ec

• lint

  Yenaled

  committed
  a117393

  Copy full SHA for a117393

• fix

  Yenaled

  committed
  8315354

  Copy full SHA for 8315354

• --exact-barcodes and -g None

  Yenaled

  committed
  bd63bfe

  Copy full SHA for bd63bfe

• add 10xv4

  Yenaled

  committed
  319b8e9

  Copy full SHA for 319b8e9

• Update bustools binaries to bustools v0.45.0

  Yenaled

  committed
  62a86ed

  Copy full SHA for 62a86ed

• Update .A to .toarray() for python3.10+

  Yenaled

  authored
  07bf9b6

  Copy full SHA for 07bf9b6

• update python versions for test

  Yenaled

  authored
  7991239

  Copy full SHA for 7991239

Commits on Mar 20, 2025

• Merge pull request #287 from josephrich98/low_memory_h5ad

  Show description for c5f60fb
  Yenaled

  authored
  c5f60fb

  Copy full SHA for c5f60fb

• removed 3.8 from github actions

  josephrich98

  committed
  6457a1e

  Copy full SHA for 6457a1e

• run yapf

  josephrich98

  committed
  2b4764e

  Copy full SHA for 2b4764e

• bump version

  josephrich98

  committed
  32cefd0

  Copy full SHA for 32cefd0

• Trigger CI

  josephrich98

  committed
  7767827

  Copy full SHA for 7767827

Commits on Mar 17, 2025

• slightly modified h5ad code to lower RAM spike when dealing with a large number of genes

  josephrich98

  committed
  7779857

  Copy full SHA for 7779857

Commits on Oct 21, 2024

• Merge pull request #272 from pachterlab/devel

  Show description for 786b2e1
  Yenaled

  authored
  786b2e1

  Copy full SHA for 786b2e1

• Bump version: 0.29.0 → 0.29.1

  Yenaled

  committed
  fefa701

  Copy full SHA for fefa701

• fix lint

  Yenaled

  committed
  e43dc87

  Copy full SHA for e43dc87

• update download_reference to support k=63

  Yenaled

  committed
  a239c12

  Copy full SHA for a239c12

• have --dry-run show the proper binaries

  Yenaled

  committed
  7a985c3

  Copy full SHA for 7a985c3

• add no-opt binary fallback; allow -i NONE for nac

  Yenaled

  committed
  b89239c

  Copy full SHA for b89239c

• Allow specifying -i NONE to skip kallisto index creation

  Yenaled

  committed
  c3665bb

  Copy full SHA for c3665bb

• update bustools binaries to 0.44.1

  Yenaled

  committed
  9f5bbc5

  Copy full SHA for 9f5bbc5

Commits on Oct 9, 2024

• Bump version: 0.28.2 → 0.29.0

  Show description for 43eddc8
  Yenaled

  authored
  43eddc8

  Copy full SHA for 43eddc8

• Bump version: 0.28.2 → 0.29.0

  Yenaled

  committed
  a03279a

  Copy full SHA for a03279a

Pagination

Previous

Next