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Commits on Jul 3, 2025

• fix the bug of endless retry (#731)

  heya5

  authored
  a134f6a

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Commits on Jul 1, 2025

• Merge pull request #727 from k-ujihara/patch/unpack_queries

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  YoshitakaMo

  authored
  747aa90

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Commits on Jun 29, 2025

• fix unpacking queries_unique

  k-ujihara

  committed
  ecc7d10

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Commits on Jun 9, 2025

• Merge pull request #680 from rachelse/dev

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  martin-steinegger

  authored
  64c8b2f

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Commits on May 22, 2025

• Merge branch 'dev' of https://github.com/rachelse/ColabFold into dev

  rachelse

  committed
  805bdb6

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• Handled aromatic bond in SMILES

  rachelse

  committed
  5fb1f53

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• Merge branch 'sokrypton:main' into dev

  rachelse

  authored
  3768cea

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Commits on May 20, 2025

• small typo AlphaFold2.ipynb (#706)

  dslv3y

  authored
  8c55fc2

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Commits on May 12, 2025

• Merge branch 'main' into dev

  martin-steinegger

  authored
  fc76d70

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Commits on May 11, 2025

• Update README.md

  martin-steinegger

  authored
  d1b8ec1

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• Update README.md

  martin-steinegger

  authored
  e46d8e5

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Commits on May 7, 2025

• Include patch from https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
  30be0a6

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Commits on Apr 23, 2025

• fixing rosettafold2 notebook

  sokrypton

  committed
  3b8f306

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Commits on Apr 22, 2025

• fix db name in GPU search

  YoshitakaMo

  authored
  09993a8

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Commits on Apr 18, 2025

• Fix bioemu install again https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
  fa6ceed

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Commits on Apr 16, 2025

• Added AF3 json instructions in readme

  rachelse

  committed
  b6b911e

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• Integrated json generation into search pipeline

  rachelse

  committed
  edc9758

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Commits on Apr 15, 2025

• Resolved conflits and updated af3-json code again

  rachelse

  committed
  f5b3fc6

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• Merge branch 'sokrypton:main' into dev

  rachelse

  authored
  792ad10

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• Trying to solve conflict with the parent repo

  rachelse

  committed
  94923c4

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• Allowed fasta file to contain non-proteins

  rachelse

  committed
  5e9e194

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Commits on Apr 14, 2025

• Allow fasta file to contain non-protein molecules

  rachelse

  committed
  c417d83

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Commits on Apr 9, 2025

• Fix bioemu, https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
  bfc0e83

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Commits on Mar 25, 2025

• Fix issue

  martin-steinegger

  committed
  0625def

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• Improve BioEmu notebook

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  martin-steinegger

  and

  josejimenezluna

  committed
  ef4d3bf

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Commits on Mar 24, 2025

• Eliminate library loading overhead in colabfold_search

  milot-mirdita

  committed
  f0bf465

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Commits on Mar 21, 2025

• fixing pytorch error in esmfold notebook

  sokrypton

  committed
  f77b71a

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Commits on Mar 18, 2025

• Update notebooks for numpy 2 changes

  milot-mirdita

  committed
  b119520

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• Update pypi action to v1.12.4

  milot-mirdita

  committed
  5d663c8

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• Update dependencies to fix numpy 2 issues

  milot-mirdita

  committed
  039aa69

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• Removed fasta parser code

  rachelse

  committed
  fcc573b

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• Deleted unnecessary files

  rachelse

  committed
  5f22b9b

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• adding some instructions to important

  sokrypton

  committed
  b0bbeb5

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• removing error message

  sokrypton

  committed
  2920394

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Commits on Mar 12, 2025

• Update batch notebook dm-haiku too

  milot-mirdita

  committed
  f2a689d

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