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Commits on Jun 17, 2022

• Merge pull request #20 from muffato/master

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  dentearl

  authored
  4e5b5de

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• Merge pull request #31 from ComparativeGenomicsToolkit/build-fixes

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  dentearl

  authored
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Commits on Jun 14, 2022

• fix sprintf buffer size warning

  glennhickey

  committed
  3dfd68b

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• move g_isVerboseFailures def to appease new gcc

  glennhickey

  committed
  33879f3

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• add another extern

  glennhickey

  committed
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• add externs to global vars to fix linking on gcc 11.2

  glennhickey

  committed
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Commits on Apr 6, 2018

• bugfix: need to add -lm to please gcc (like in the other Makefiles)

  muffato

  committed
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Commits on Sep 14, 2017

• Remove linking flag,

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  dentearl

  authored
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Commits on Apr 20, 2016

• Update mafExtractorAPI.c

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  dentearl

  committed
  6b6a73c

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• Update common.mk

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  dentearl

  committed
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Commits on Nov 21, 2015

• Merge pull request #12 from dwinter/subprocess_fix

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  dentearl

  committed
  d34846a

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Commits on Nov 20, 2015

• add `universal_newlines=True` to subprocess calls in CreateVersionSrcs

  dwinter

  committed
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Commits on Jan 5, 2015

• How to cite

  dentearl

  committed
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Commits on Oct 20, 2014

• update dates.

  dentearl

  committed
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Commits on Jul 9, 2014

• updating documentation

  dentearl

  committed
  b8edc71

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• resolving merge

  dentearl

  committed
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• addressing issue #4, adding -DNDEBUG to production flags.

  dentearl

  committed
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• Merge pull request #7 from adamnovak/master

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  dentearl

  committed
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• Removing unused sum variable

  adamnovak

  committed
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Commits on Jul 8, 2014

• making sure each component can re-build the library objects if need be

  dentearl

  committed
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Commits on Jul 2, 2014

• making the structure of the framework more linux idiomatic

  dentearl

  committed
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Commits on Mar 25, 2014

• adjusting testing output

  dentearl

  committed
  e1b7327

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• correcting a link to math library mistake

  dentearl

  committed
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• Correcting a bug in sequence matrix generation, adding a unit test to catch the original error.

  dentearl

  committed
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Commits on Feb 24, 2014

• Making the build versioning system have a clear error when git is not present.

  dentearl

  committed
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Commits on Jan 24, 2014

• fixing the output header

  dentearl

  committed
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• Cleaned up hack.

  benedictpaten

  committed
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• -

  benedictpaten

  committed
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• Fix to speed up nasty case of very deep maf blocks

  benedictpaten

  committed
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Commits on Jan 2, 2014

• Fixing output of mafCoverage.

  benedictpaten

  committed
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• Fix to naming of fields in output of mafCoverage.

  benedictpaten

  committed
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Commits on Dec 27, 2013

• Weakening assert to work with hal generated maf.

  benedictpaten

  committed
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Commits on Dec 26, 2013

• Changing assert to be slightly more relaxed.

  benedictpaten

  committed
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Commits on Dec 22, 2013

• Merge branch 'refs/heads/alignathon' of git@github.com:dentearl/mafTools.git into HEAD

  benedictpaten

  committed
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• Fix to silly strand bug

  benedictpaten

  committed
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