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Commits on May 20, 2025

• small typo AlphaFold2.ipynb (#706)

  dslv3y

  authored
  8c55fc2

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Commits on May 11, 2025

• Update README.md

  martin-steinegger

  authored
  d1b8ec1

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• Update README.md

  martin-steinegger

  authored
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Commits on May 7, 2025

• Include patch from https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
  30be0a6

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Commits on Apr 23, 2025

• fixing rosettafold2 notebook

  sokrypton

  committed
  3b8f306

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Commits on Apr 22, 2025

• fix db name in GPU search

  YoshitakaMo

  authored
  09993a8

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Commits on Apr 18, 2025

• Fix bioemu install again https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
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Commits on Apr 9, 2025

• Fix bioemu, https://github.com/sokrypton/ColabFold/issues/701

  martin-steinegger

  committed
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Commits on Mar 25, 2025

• Fix issue

  martin-steinegger

  committed
  0625def

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• Improve BioEmu notebook

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  martin-steinegger

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  josejimenezluna

  committed
  ef4d3bf

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Commits on Mar 24, 2025

• Eliminate library loading overhead in colabfold_search

  milot-mirdita

  committed
  f0bf465

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Commits on Mar 21, 2025

• fixing pytorch error in esmfold notebook

  sokrypton

  committed
  f77b71a

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Commits on Mar 18, 2025

• Update notebooks for numpy 2 changes

  milot-mirdita

  committed
  b119520

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• Update pypi action to v1.12.4

  milot-mirdita

  committed
  5d663c8

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• Update dependencies to fix numpy 2 issues

  milot-mirdita

  committed
  039aa69

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• adding some instructions to important

  sokrypton

  committed
  b0bbeb5

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• removing error message

  sokrypton

  committed
  2920394

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Commits on Mar 12, 2025

• Update batch notebook dm-haiku too

  milot-mirdita

  committed
  f2a689d

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• Temporary fix for jax update in colab

  milot-mirdita

  committed
  70a3ebd

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Commits on Mar 1, 2025

• Update README.md

  martin-steinegger

  authored
  0662601

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Commits on Feb 24, 2025

• Created using Colab

  martin-steinegger

  committed
  51c4a0d

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Commits on Feb 23, 2025

• Update BioEmu

  martin-steinegger

  committed
  de1ae99

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• First version of BioEmu notebook

  martin-steinegger

  committed
  cc06daf

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Commits on Jan 16, 2025

• fixing relax (openmm upgraded to 8.0.0)

  sokrypton

  committed
  406d4c6

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• setting openmm-8.0.0 (required for python 3.11, new google colab default)

  sokrypton

  committed
  09e31eb

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Commits on Jan 3, 2025

• Merge pull request #672 from kierandidi/main

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  martin-steinegger

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Commits on Dec 21, 2024

• add -f test for database download

  kierandidi

  committed
  24e79a5

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Commits on Dec 20, 2024

• change database setup script to include gpu options

  kierandidi

  committed
  1c29f36

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Commits on Dec 19, 2024

• mmseqs gpu support and README addition

  kierandidi

  committed
  88e5efa

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Commits on Dec 18, 2024

• Changing default, adding colab link

  sokrypton

  committed
  00de5b4

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• calculating actifpTM only for interface residues, based on the predicted distogram (#671)

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  3 peopleauthored
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Commits on Nov 19, 2024

• Boltz: Add smiles lookup from compound name from PubChem API

  milot-mirdita

  committed
  e2ca9e8

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Commits on Nov 18, 2024

• Switch to High RAM type

  martin-steinegger

  committed
  0b6d456

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• Download boltz weights from R2

  milot-mirdita

  committed
  15050d8

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• Fix homo-x-mer

  martin-steinegger

  committed
  7932813

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